Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015892142.1_cds_XP_016447040.1_41840
CDS Infomation

[gene=LOC107772072] [db_xref=GeneID:107772072] [protein=probable serine/threonine-protein kinase At1g54610] [protein_id=XP_016447040.1] [location=join(34271..34633,35124..35408,35518..35835,35987..36214,36485..36582,37428..37518,37660..38187,38700..38861)] [gbkey=CDS]
Sequence

ATGGGTTGTGTGGCCTCGAAACAGACCGTGTCGGTAACCCCTGCATGTGATCAATATTCA
GGGACTCTCAGAGAAAATGACGACAGTAGGAGCCATGTCGGCAGTGATACATTAGTATCT
GAATTTGATATGACGAATAAGGTGAAGAAGAGAGGGGAATTATCAGGACTAAGTGGAGGC
GCGAGCGAGTTAAATGAGTCGGGCAAGGAATATTCTAATGGTGATCAATCAGTGAGTTTG
ATGAAGTATGTGGAAGGAGAGCAAGTTGCTGCAGGTTGGCCTGTATGGCTTAGTACTGTT
GCAGCTGAAGCCATTCATGGCTGGTTGCCTCTCAAACCTGAGTCTTTTCAGAAATTGGAT
AAGATAGGTCAGGGTACATATAGCAGCGTATTCAGAGCACGCGATCTGGAAAGTGGAAGG
ACAGTTGCACTGAAGAAAGTGCGATTTGATAACTTTGAGCCAGAAAGTGTTAGATTTATG
GCACGAGAAATTTTGATTCTTCGCAGGCTTGACCATCCCAATATAATGAAGTTAGAGGGG
ATAATTGCCTCCAGATTATCTTCTAGCATATATCTTGTGTTTGAGTACATGGAACATGAT
ATTTCAGGACTCCTGTCCTGTCCTGAAGTCAAGTTCAATGAATCACAGGTTAAATGCTTA
ATGAAACAGTTGTTATCTGGACTTGACCATTGTCATTCTCGAGGTATAATGCATCGGGAT
ATCAAAGGTGCAAATCTTCTAGTAAATAATGAGGGAATTCTGAAGGTTGCAGACTTTGGA
TTGGCGAACTTCTCTGACCTTGGAACAAAGCAACCACTAACCAGTCGAGTTGTCACTTTA
TGGTATCGTCCTCCAGAACTTCTGTTGGGAGCCACGGATTATGCAGCTTCTGTGGATCTC
TGGAGTGTCGGATGTGTATTTGCGGAAATTCTTACTGGTAAACCAATTCTTCAGGGGAGA
ACTGAGGTTGAACAGCTGCATAAAGTATTTAAACTTTGTGGATCTCCACCAGATGATTAC
TGGAAGAGATCTAAACTTCCTCACGCGACTATATTTAAACCACAGCATCCTTATGAGAGC
TGTCTTTGGAACACCTTTAAAGATTTGCCAAAAAGTGCAGTCTCACTCATAGAAACTCTT
CTTTCTGTGGAGCCACACAAACGTGGAACCGCTTCTTCTGCCCTTGCATCTGAGTATTTC
AAGACGAAGCCTCATGCTTGTGATCCTTCAAGCCTGCCAAAGTACCCACCAAGCAAAGAG
ATAGATGCTAAGCACCTTGAAGATGCAAAAAGGAAGAAGCCAAGTGGAAGAGCCCGTGCA
CCTGACCCAACAAGAAAGTTAACTAGAAAGCAGAATGGCCTCCGTAAACTAGCACCAGAA
GAGAATTTGCCCATCCAAAATAAAGGTGCTCATATAAGTGACTGCAATAATGTAACTACT
CAAGAAGAAAGAGATACAATAACAAGTCTTGCGCGACCTAAGCCATCAGTTGATATGATG
GTAAAGACTTTCCATGTCAAGAATGCATCTCAAGGTGATGTCCCCTTTCCAGGTCCACTT
CAAATTTCAGGATCAAGTGGTTTTGCATGGGCAAAAAGAAGGTTCGACGATTCATCAGTA
AGATCACGAAGGAGAACTAGTTCGAGAAGCCTTATTTTTGAACATTCAGTTGCATTGCAT
GTGAAAAATAACATGGACCCAAAAGTACAAGGCAACTGTGAACTTATCAATGCAAATCAG
ACCAATTCTGTGGGACATGATACCGACGAATCCACCAAGCATGCAATTCGTCAACGTTGG
AGCCAATTAGAGCGCCCAGATTCCTTTGATGCTTCTGATGGCTACCATTCACAAGAACTG
TCACTGACACAATATCTAAAAGAGGAAACTGCTATCAAGAGAATCAATTTGGTACAGGAT
CAAGTGGATAAAGTCGAATTTTCCGGACCATTGCTGTCTCAAACACAAACAGTTGAAGAG
CTCCTTGAGAAACATGAGCGTCAGATCCGCCAGGCTGTTCGACAATCATGGTTCCAAAGA
GGATTAAAAGTTCACCAAATGTTTGCAACATAG

Peptide Sequence

PEP ID

XP_016447040.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase At1g54610 [Nicotiana tabacum]
Sequence

MGCVASKQTVSVTPACDQYSGTLRENDDSRSHVGSDTLVSEFDMTNKVKKRGELSGLSGG
ASELNESGKEYSNGDQSVSLMKYVEGEQVAAGWPVWLSTVAAEAIHGWLPLKPESFQKLD
KIGQGTYSSVFRARDLESGRTVALKKVRFDNFEPESVRFMAREILILRRLDHPNIMKLEG
IIASRLSSSIYLVFEYMEHDISGLLSCPEVKFNESQVKCLMKQLLSGLDHCHSRGIMHRD
IKGANLLVNNEGILKVADFGLANFSDLGTKQPLTSRVVTLWYRPPELLLGATDYAASVDL
WSVGCVFAEILTGKPILQGRTEVEQLHKVFKLCGSPPDDYWKRSKLPHATIFKPQHPYES
CLWNTFKDLPKSAVSLIETLLSVEPHKRGTASSALASEYFKTKPHACDPSSLPKYPPSKE
IDAKHLEDAKRKKPSGRARAPDPTRKLTRKQNGLRKLAPEENLPIQNKGAHISDCNNVTT
QEERDTITSLARPKPSVDMMVKTFHVKNASQGDVPFPGPLQISGSSGFAWAKRRFDDSSV
RSRRRTSSRSLIFEHSVALHVKNNMDPKVQGNCELINANQTNSVGHDTDESTKHAIRQRW
SQLERPDSFDASDGYHSQELSLTQYLKEETAIKRINLVQDQVDKVEFSGPLLSQTQTVEE
LLEKHERQIRQAVRQSWFQRGLKVHQMFAT

Transcript Sequence

Gene sequence data has not been registered.